BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004C11SP1|AL425245
(1042 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1980 0.0
>3x_Contig1741
Length = 21706
Score = 1980 bits (998), Expect = 0.0
Identities = 1036/1042 (99%), Gaps = 5/1042 (0%)
Strand = Plus / Minus
Query: 1 gatctacttccatcgtgctattggtcgtttacgtattgtttttgattttccaacttggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2890 gatctacttccatcgtgctattggtcgtttacgtattgtttttgattttccaacttggtt 2831
Query: 61 ctcatcgtgtcatgttcgaagaa-aaaccgaagaaactgaagaagtattgaacatccatc 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2830 ctcatcgtgtcatgttcgaagaacaaaccgaagaaactgaagaagtattgaacatccatc 2771
Query: 120 aacaacacgaacaaatttcagaatcaatgagtttgagatcctcgttgatcttcttagcaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2770 aacaacacgaacaaatttcagaatcaatgagtttgagatcctcgttgatcttcttagcaa 2711
Query: 180 tcactactattctcgtgtccatctgtgccgatttcctcgttgggaccatcgatgacatcg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2710 tcactactattctcgtgtccatctgtgccgatttcctcgttgggaccatcgatgacatcg 2651
Query: 240 tcgtgagtaccggtctatcgaaaactttcatcggtcttattgtgattccaatcgtcggca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2650 tcgtgagtaccggtctatcgaaaactttcatcggtcttattgtgattccaatcgtcggca 2591
Query: 300 atgcagcagagcacgtaacaagtgtcatcgttgccatgaaggacaaaatggacttggccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2590 atgcagcagagcacgtaacaagtgtcatcgttgccatgaaggacaaaatggacttggccc 2531
Query: 360 taagtgttgccattgggtcctcactacaaattgcccttttcgtgactccattcatggtac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2530 taagtgttgccattgggtcctcactacaaattgcccttttcgtgactccattcatggtac 2471
Query: 420 tagtgggatgggccattgatgtgccaatgacattgaacttctctacattcgagaccgtta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2470 tagtgggatgggccattgatgtgccaatgacattgaacttctctacattcgagaccgtta 2411
Query: 480 ttatgttggtttcggtgttcctatctaactacttgatcctcgatggtgaatccaattgga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2410 ttatgttggtttcggtgttcctatctaactacttgatcctcgatggtgaatccaattgga 2351
Query: 540 tggaagggtccatgtcgctagccatgtatgcgctagtcgccttggcattcttctactacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2350 tggaagggtccatgtcgctagccatgtatgcgctagtcgccttggcattcttctactacc 2291
Query: 600 cagatgaacaggcagtgaattaaatgatcttcttatccgattattacttttcttcctttc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2290 cagatgaacaggcagtgaattaaatgatcttcttatccgattattacttttcttcctttc 2231
Query: 660 cctatcaaagcacaaggccccaaaaaccaaaaaaaaatctataaacactactcactaact 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2230 cctatcaaagcacaaggccccaaaaaccaaaaaaaaatctataaacactactcactaact 2171
Query: 720 ctctccaagatgactagttcacatacatgaatcatacggtatatttccccgtaccgtgct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2170 ctctccaagatgactagttcacatacatgaatcatacggtatatttccccgtaccgtgct 2111
Query: 780 gtgtatcaatttctaactattttctctgtatcataaagaaaactaccggtgtatagacaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2110 gtgtatcaatttctaactattttctctgtatcataaagaaaactaccggtgtatagacaa 2051
Query: 840 tctcaaaattactataaaactgaatttctcgaaaaccagcatttgctattttttcagttg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2050 tctcaaaattactataaaactgaatttctcgaaaaccagcatttgctattttttcagttg 1991
Query: 900 ttccttttcaaaattttcgctttttccaagttcatcagaatttcgcgagttccttaattt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1990 ttccttttcaaaattttcgctttttccaagttcatcagaatttcgcgagttccttaattt 1931
Query: 960 -aactatgaacacg-aaaagctggcagagatttacttcattgcaggg-tttctatggatc 1016
||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1930 aaactatgaacacgaaaaagctggcagaaatttacttcattgcagggttttctatggatc 1871
Query: 1017 gc-aagagtgaggttttctaaa 1037
|| |||||||||||||||||||
Sbjct: 1870 gcaaagagtgaggttttctaaa 1849
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8331
Number of Sequences: 1807
Number of extensions: 8331
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 1042
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1026
effective length of database: 10,329,639
effective search space: 10598209614
effective search space used: 10598209614
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)